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Archive

Home Category: Publication

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5

Oct
Local topology, bifurcations and mutation hot-spots in proteins with SARS-CoV-2 spike protein as an example
Publication
Novel topological methods are introduced to protein research. The aim [...] Read More
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4

Oct
Adsorption of Semiflexible Polymers in Cylindrical Tubes
News, Publication
Conformations of wormlike chains in cylindrical pores with attractive walls [...] Read More
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17

Sep
Protein self-entanglement modulates successful folding to the native state: A multi-scale modeling study
News, Publication
The computer-aided investigation of protein folding has greatly benefited from [...] Read More
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15

Sep
A Topological Selection of Folding Pathways from Native States of Knotted Proteins
News, Publication
Understanding how knotted proteins fold is a challenging problem in [...] Read More
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28

Aug
Investigating site-selection mechanisms of retroviral integration in supercoiled DNA braids
News, Publication
We theoretically study the integration of short viral DNA in [...] Read More
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16

Aug
Poincaré index formula, vortices and superflow saddle points in a non-rotating cold atom Bose-Einstein condensate
Publication
A dilute gas of Bose-Einstein condensed atoms, in a non-rotating [...] Read More
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31

Jul
Physical entanglements mediate coherent motion of the active topological glass confined within a spherical cavity
Publication
Motivated by chromosomes enclosed in nucleus and the recently discovered [...] Read More
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27

Jul
Vortex precession and exchange in a Bose-Einstein condensate
News, Publication
Vortices in a Bose-Einstein condensate are modelled as spontaneously symmetry [...] Read More
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25

Jul
Travelling colourful patterns in self-organized cellulose-based liquid crystalline structures
News, Publication
Cellulose-based systems are useful for many applications. However, the issue [...] Read More
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20

Jul
Monte Carlo simulation of a lattice model for the dynamics of randomly branching double-folded ring polymers
News, Publication
Supercoiled DNA, crumpled interphase chromosomes, and topologically constrained ring polymers [...] Read More

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